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Bacterial and Fungal Identification

Common methods used for identifying bacterial and fungal strains are 16S rRNA gene sequencing and Internal Transcribed Spacer (ITS) sequencing respectively. These highly conserved regions are standard tools used to construct bacterial and fungal phylogenies and taxonomies. Azenta Life Sciences, formerly Azenta offers pre-developed PCR assays that cover essential regions within the 16S rRNA gene and the ribosomal ITS region used for amplification and Sanger sequencing of clonal samples.

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16S rRNA: Let GENEWIZ Help Construct Your Phylogenies

The 16S ribosomal RNA subunit is an essential component in the 30S ribosomal complex in prokaryotes. Due to the structural importance of this gene, the pace of evolution of the gene has been relatively slow. Due to this conservation, scientists can use the 16S rRNA gene to identify prokaryotic species present in a sample. GENEWIZ sequences the 16S rRNA gene from your bacterial colonies rapidly and effectively. Simply submit your clonal bacterial sample, and GENEWIZ will perform PCR amplification and Sanger DNA sequencing using 16S primers. Save time at the bench - no bacterial gDNA extraction is required.


16S rRNA Gene Sequencing Service Details

  • PCR amplification directly from clonal bacterial colonies
  • Enzymatic purification of crude PCR product for enhanced sequencing quality
  • Additional analysis of PCR product by gel electrophoresis available by request
  • Forward and reverse sequencing of the 16S rRNA gene
  • Starting materials accepted:
    • Clonal Bacterial Colonies
    • Extracted gDNA

FEATURES & BENEFITS

High Quality: Robust 16S rRNA and ITS PCR protocols and high quality sequencing data​
Fast & Reliable Turnaround: Data delivery starting at just 2 business days​
Industry-leading Customer Service: Easily accessible, dedicated customer service available Monday – Friday ​
Superior Customer Service
Award-winning, easily accessible, dedicated project managers available Monday – Friday

16S rRNA/ITS Sequencing

  • Submit clonal sample


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  • PCR



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  • Sanger
    Sequencing



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Colony is picked from plate for PCR amplification.
Gene coding for 16S rRNA is amplified by PCR using gene-specific primers. Quality control: PCR product is observed by agarose gel electrophoresis.
Resulting PCR product is sequenced in both directions.

Deliverables

  • Chromatogram file (.ab1)
  • Sequencing file (.seq)
  • Agarose gel analysis available
  • Timely project updates